Bcl2fastq

Description

The bcl2fastq Conversion Software both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis. A user guide is available online: [1]

Note About this Software

Version

  • 2.19.1

Authorized Users

  • CIRCE account holders
  • SC account holders

Platforms

  • CIRCE cluster
  • SC cluster

Modules

Bcl2fastq requires the following module file to run:

  • apps/bcl2fastq/2.19.1

More Job Information

See the following for more detailed job submission information:

Reporting Bugs

Report bugs with Bcl2fastq to the IT Help Desk: rc-help@usf.edu